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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G XRCC6 chr22:42017123-42060052:+ 0.7 9.37 2.89E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G YDJC chr22:21982378-21984353:- 0.44 6.35 5.04E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G YPEL1 chr22:22051833-22090123:- 0.58 7.21 2.16E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G ZBED4 chr22:50247490-50283726:+ 0.45 6.23 1.02E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G ZC3H7B chr22:41697526-41756151:+ 0.6 7.24 1.79E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G ZDHHC8 chr22:20116979-20135530:+ 0.47 5.99 4.1E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G ZMAT5 chr22:30126945-30163000:- 0.5 8.28 1.24E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G ZNF280B chr22:22838767-22863472:- 0.55 6.89 1.74E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G ZNF70 chr22:24080865-24093279:- 0.5 6.03 3.19E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G ZNF74 chr22:20748405-20762751:+ 0.62 6.6 1.07E-10 Box Plot
THCA rs9621705 chr22:33867464 A/G ANKRD54 chr22:38226862-38245334:- 0.55 6.31 6.5E-10 Box Plot
THCA rs9621705 chr22:33867464 A/G C22orf40 chr22:46639911-46646193:- 0.54 6.65 8.2E-11 Box Plot
THCA rs9621705 chr22:33867464 A/G CYTSA chr22:24666786-24813707:+ 0.47 6.02 3.47E-9 Box Plot
THCA rs9621705 chr22:33867464 A/G EIF3D chr22:36906897-36925483:- 0.57 6.37 4.4E-10 Box Plot
THCA rs9621705 chr22:33867464 A/G HSCB chr22:29138019-29153503:+ 0.57 6.56 1.41E-10 Box Plot